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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs66674708 chr6:86899796 A/G SNHG5 chr6:86370668-86388454:- 0.82 5.48 1.25E-6 Box Plot
ACC rs66688157 chr7:64532115 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs6670064 chr1:213069420 C/T LQK1 chr1:213029947-213031480:- 0.75 6.19 9.52E-8 Box Plot
ACC rs667046 chr1:245215883 A/G EFCAB2 chr1:245133007-245290466:+ 0.63 5.2 3.39E-6 Box Plot
ACC rs66789118 chr7:97404424 TCTTAACCCA/T TECPR1 chr7:97843936-97881563:- 0.71 5.44 1.47E-6 Box Plot
ACC rs6679951 chr1:213093069 T/C LQK1 chr1:213029947-213031480:- 0.65 5.33 2.13E-6 Box Plot
ACC rs6685877 chr1:213044141 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs66906873 chr7:76143806 G/A POMZP3 chr7:76239303-76256578:- 0.96 8.26 4.94E-11 Box Plot
ACC rs669119 chr20:44385581 A/G WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs66954605 chr7:72196999 G/A TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs66964201 chr1:235328582 T/C RBM34 chr1:235294498-235324772:- 0.74 6.07 1.48E-7 Box Plot
ACC rs6699566 chr1:245136331 C/T EFCAB2 chr1:245133007-245290466:+ 0.62 5.77 4.39E-7 Box Plot
ACC rs6703156 chr1:213049353 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs67037252 chr6:86901263 G/A SNHG5 chr6:86370668-86388454:- 0.82 5.48 1.25E-6 Box Plot
ACC rs6708878 chr2:99801564 G/A TSGA10 chr2:99613724-99771427:- 0.57 5.58 8.74E-7 Box Plot